BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021H04SP1|AL427826
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1783 1680 0.0
>3x_Contig1783
Length = 22123
Score = 1680 bits (840), Expect = 0.0
Identities = 888/908 (97%), Gaps = 3/908 (0%)
Strand = Plus / Plus
Query: 1 gcagagccagatccagatccagatccagatccatcagawccagaaccgtcgttagagctg 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4006 gcagagccagatccagatccagatccagatccatcagaaccagaaccgtcgttagagctg 4065
Query: 61 gaatcgttgctagagcctgawccattggtagaaccagagttggagccagagttggagccg 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4066 gaatcgttgctagagcctgaaccattggtagaaccagagttggagccagagttggagccg 4125
Query: 121 ttgttagagtcagagccagagccagagcmaaagtctgaacmagaaccagaaccgttgtca 180
|||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 4126 ttgttagagtcagagccagagccagagccagagtctgaaccagaaccagaaccgttgtca 4185
Query: 181 gaagcggatagtagtagcagaagctgaacctgagccagatccagatccatctgawccgga 240
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4186 gaagcgg-tagtagtagcagaagctgaacctgagccagatccagatccatctgaaccgga 4244
Query: 241 accgtcgttagaggtggtggaggtagcagaagcagagcctgagcctgaacctgatccatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4245 accgtcgttagaggtggtggaggtagcagaagcagagcctgagcctgaacctgatccatc 4304
Query: 301 tgawccggaaccgtcgttagaggtggtggaggtagcggaagctgagcctgagcctgagcc 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4305 tgaaccggaaccgtcgttagaggtggtggaggtagcggaagctgagcctgagcctgagcc 4364
Query: 361 tgagcctgaaccggaaccattgtyagttgtggtagaaataggctctgtagaagattggtc 420
||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||
Sbjct: 4365 tgagcctgaaccggaaccattgtcagtagtggtaggaataggctctgtagaagattggtc 4424
Query: 421 gatgaccgtkctggtgttgtcatcacttatcgtagaaacatcagatgggttcgaatcagt 480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4425 gatgaccgtgctggtgttgtcatcacttatcgtagaaacatcagatgggttcgaatcagt 4484
Query: 481 gtaccaaggagctgtttctggacaaggttgacaagcttcaggaatctcaaaggtaggaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4485 gtaccaaggagctgtttctggacaaggttgacaagcttcaggaatctcaaaggtaggaac 4544
Query: 541 gtctccactgttatawatacccccattcagaaccgtaatataacctgctccgawatcgat 600
||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4545 gtctccactgtaataaatacccccattcagaaccgtaatataacctgctccgaaatcgat 4604
Query: 601 gtcatcaacatagaatttagtgcggtcgtatccttttcctatatccaacttataagtgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4605 gtcatcaacatagaatttagtgcggtcgtatccttttcctatatccaacttataagtgat 4664
Query: 661 aagcagacttgaaactgtgaggataccagtgtcttcatcatattggaattctctaattgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4665 aagcagacttgaaactgtgaggataccagtgtcttcatcatattggaattctctaattgc 4724
Query: 721 aacagctaaaccaaccttttgtttaccaaaaccaacaactttgtaaacaaatgttggcga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4725 aacagctaaaccaaccttttgtttaccaaaaccaacaactttgtaaacaaatgttggcga 4784
Query: 781 acctagtgcttccagacgtagagcagcactgtcggaactcaagtwaattgtttgatcagt 840
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4785 acctagtgcttccagacgtagagcagcactgtcggaactcaagtaaattgtttgatcagt 4844
Query: 841 tagttggtaa-cattgtwagcgcagaacaaaccttcatcaccgatacttatacaa-cact 898
|||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 4845 tagttggtaaccattgtaagcccagaacaaaccttcatcaccgatacttatacaaccact 4904
Query: 899 ttcaccgg 906
||||||||
Sbjct: 4905 ttcaccgg 4912
Score = 494 bits (247), Expect = e-139
Identities = 288/304 (94%), Gaps = 7/304 (2%)
Strand = Plus / Plus
Query: 1 gcagagccagatccagatccagatccagatccatcagawccagaaccgtcgttagagctg 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3670 gcagagccagatccagatccagatccagatccatcagaaccagaaccgtcgttagagctg 3729
Query: 61 gaatcgttgctagagcctgawccattggtagaaccagagttggagccagagttggagccg 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3730 gaatcgttgctagagcctgaaccattggtagaaccagagttggagccagagttggagccg 3789
Query: 121 ttgttagagt------cagagccagagccagagcmaaagtctgaacmagaaccagaaccg 174
|||||||||| |||||||||||||||||| | ||||||||| |||||||||||||
Sbjct: 3790 ttgttagagtcagagccagagccagagccagagccagagtctgaaccagaaccagaaccg 3849
Query: 175 ttgtcagaagcggatagtagtagcagaagctgaacctgagccagatccagatccatctga 234
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3850 ttgtcagaagcgg-tagtagtagcagaagctgaacctgagccagatccagatccatctga 3908
Query: 235 wccggaaccgtcgttagaggtggtggaggtagcagaagcagagcctgagcctgaacctga 294
|||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 3909 accggaaccgtcgttagaggtggtggaggtagcggaagctgagcctgagcctgagcctga 3968
Query: 295 tcca 298
||||
Sbjct: 3969 tcca 3972
Score = 184 bits (92), Expect = 3e-46
Identities = 107/114 (93%)
Strand = Plus / Plus
Query: 54 agagctggaatcgttgctagagcctgawccattggtagaaccagagttggagccagagtt 113
|||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 3438 agagctggaatcgttgttagagcctgaaccattggtagaaccagagttggagctagagtt 3497
Query: 114 ggagccgttgttagagtcagagccagagccagagcmaaagtctgaacmagaacc 167
||||||||||||||||||||||||||||||||||| | ||||||||| |||||
Sbjct: 3498 ggagccgttgttagagtcagagccagagccagagccagagtctgaaccggaacc 3551
Score = 162 bits (81), Expect = 1e-39
Identities = 103/111 (92%)
Strand = Plus / Plus
Query: 263 gtagcagaagcagagcctgagcctgaacctgatccatctgawccggaaccgtcgttagag 322
||||||||||| || |||||||| || || ||||||||||| ||||||||||||||||||
Sbjct: 3868 gtagcagaagctgaacctgagccagatccagatccatctgaaccggaaccgtcgttagag 3927
Query: 323 gtggtggaggtagcggaagctgagcctgagcctgagcctgagcctgaaccg 373
||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 3928 gtggtggaggtagcggaagctgagcctgagcctgagcctgatccagaaccg 3978
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4815
Number of Sequences: 1807
Number of extensions: 4815
Number of successful extensions: 100
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)